Hierarchy For All Packages

Package Hierarchies:

de.zimek.ding, de.zimek.proteinfeatures, de.zimek.proteinfeatures.aaindex, de.zimek.proteinfeatures.attributeAssigner, de.zimek.proteinfeatures.attributeAssigner.composition, de.zimek.proteinfeatures.attributeAssigner.dingAttributes, de.zimek.proteinfeatures.attributeAssigner.distribution, de.zimek.proteinfeatures.attributeAssigner.transition, de.zimek.proteinfeatures.groups, de.zimek.proteinfeatures.parser, de.zimek.proteinfeatures.protein

Class Hierarchy

• class java.lang.Object
  • class de.zimek.proteinfeatures.attributeAssigner.AbstractArffRealAttributeAssigner (implements de.zimek.proteinfeatures.attributeAssigner.ArffAttributeAssigner)
    • class de.zimek.proteinfeatures.attributeAssigner.AbstractGroupAssigner
      • class de.zimek.proteinfeatures.attributeAssigner.composition.AbstractGroupCompositionAssigner
        • class de.zimek.proteinfeatures.attributeAssigner.composition.AAComposition
        • class de.zimek.proteinfeatures.attributeAssigner.composition.HydrophobicityComposition
        • class de.zimek.proteinfeatures.attributeAssigner.composition.NormalizedVanDerWaalsVolumeComposition
        • class de.zimek.proteinfeatures.attributeAssigner.composition.PolarityComposition
        • class de.zimek.proteinfeatures.attributeAssigner.composition.PolarizabilityComposition
        • class de.zimek.proteinfeatures.attributeAssigner.composition.SSComposition
      • class de.zimek.proteinfeatures.attributeAssigner.distribution.AbstractGroupDistributionAssigner
        • class de.zimek.proteinfeatures.attributeAssigner.distribution.AADistribution
        • class de.zimek.proteinfeatures.attributeAssigner.distribution.HydrophobicityDistribution
        • class de.zimek.proteinfeatures.attributeAssigner.distribution.NormalizedVanDerWaalsVolumeDistribution
        • class de.zimek.proteinfeatures.attributeAssigner.distribution.PolarityDistribution
        • class de.zimek.proteinfeatures.attributeAssigner.distribution.PolarizabilityDistribution
        • class de.zimek.proteinfeatures.attributeAssigner.distribution.SSDistribution
      • class de.zimek.proteinfeatures.attributeAssigner.AbstractGroupTransitionAssigner
        • class de.zimek.proteinfeatures.attributeAssigner.transition.AATransition
        • class de.zimek.proteinfeatures.attributeAssigner.transition.HydrophobicityTransition
        • class de.zimek.proteinfeatures.attributeAssigner.transition.NormalizedVanDerWaalsVolumeTransition
        • class de.zimek.proteinfeatures.attributeAssigner.transition.PolarityTransition
        • class de.zimek.proteinfeatures.attributeAssigner.transition.PolarizabilityTransition
        • class de.zimek.proteinfeatures.attributeAssigner.transition.SSTransition
    • class de.zimek.proteinfeatures.attributeAssigner.AutoCorrelationFunction (implements de.zimek.proteinfeatures.attributeAssigner.ArffAttributeAssigner)
    • class de.zimek.proteinfeatures.attributeAssigner.dingAttributes.DingAttribute
      • class de.zimek.proteinfeatures.attributeAssigner.dingAttributes.DingCompositionLength
      • class de.zimek.proteinfeatures.attributeAssigner.dingAttributes.DingHydrophobicity
      • class de.zimek.proteinfeatures.attributeAssigner.dingAttributes.DingPolarity
      • class de.zimek.proteinfeatures.attributeAssigner.dingAttributes.DingPolarizability
      • class de.zimek.proteinfeatures.attributeAssigner.dingAttributes.DingSecondary
      • class de.zimek.proteinfeatures.attributeAssigner.dingAttributes.DingVolume
    • class de.zimek.proteinfeatures.attributeAssigner.MotifAssigner
    • class de.zimek.proteinfeatures.attributeAssigner.ProteinLength
  • class de.zimek.proteinfeatures.groups.AbstractGroup (implements de.zimek.proteinfeatures.groups.Group)
    • class de.zimek.proteinfeatures.groups.Hydrophobicity
    • class de.zimek.proteinfeatures.groups.NormalizedVanDerWaalsVolume
    • class de.zimek.proteinfeatures.groups.Polarity
    • class de.zimek.proteinfeatures.groups.Polarizability
  • class de.zimek.proteinfeatures.parser.AbstractParser (implements de.zimek.proteinfeatures.parser.Parser)
    • class de.zimek.proteinfeatures.parser.AstralDBParser
    • class de.zimek.proteinfeatures.parser.ManifoldParser
    • class de.zimek.proteinfeatures.parser.McGuffinParser
  • class de.zimek.proteinfeatures.ArffFileCreator
  • class de.zimek.ding.Arffizer
  • class de.zimek.proteinfeatures.groups.CharGroup (implements de.zimek.proteinfeatures.groups.Group)
    • class de.zimek.proteinfeatures.groups.AA
    • class de.zimek.proteinfeatures.groups.SS
  • class de.zimek.ding.DomainToAstralMapper
  • class de.zimek.proteinfeatures.parser.DSSPInterpreter
  • class de.zimek.proteinfeatures.protein.ID (implements java.lang.Comparable)
    • class de.zimek.proteinfeatures.protein.CathID
    • class de.zimek.proteinfeatures.protein.ScopID
  • class de.zimek.proteinfeatures.aaindex.OobatakeOoi (implements de.zimek.proteinfeatures.aaindex.AAIndex)
  • class de.zimek.proteinfeatures.protein.Protein

Interface Hierarchy

• interface de.zimek.proteinfeatures.aaindex.AAIndex
• interface de.zimek.proteinfeatures.attributeAssigner.ArffAttributeAssigner
• interface de.zimek.proteinfeatures.groups.Group
• interface de.zimek.proteinfeatures.parser.Parser
• interface de.zimek.proteinfeatures.protein.ProteinConstants