de.zimek.proteinfeatures.attributeAssigner
Class AbstractGroupTransitionAssigner

java.lang.Object
  de.zimek.proteinfeatures.attributeAssigner.AbstractArffRealAttributeAssigner
      de.zimek.proteinfeatures.attributeAssigner.AbstractGroupAssigner
          de.zimek.proteinfeatures.attributeAssigner.AbstractGroupTransitionAssigner

All Implemented Interfaces:

ArffAttributeAssigner

Direct Known Subclasses:

AATransition, HydrophobicityTransition, NormalizedVanDerWaalsVolumeTransition, PolarityTransition, PolarizabilityTransition, SSTransition

public abstract class AbstractGroupTransitionAssigner

extends AbstractGroupAssigner

Author:

Arthur Zimek

Field Summary

Fields inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractGroupAssigner

group, type

Fields inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractArffRealAttributeAssigner

WHITESPACE

Fields inherited from interface de.zimek.proteinfeatures.attributeAssigner.ArffAttributeAssigner

ATTRIBUTE_MARK

Constructor Summary

protected

AbstractGroupTransitionAssigner()

Method Summary

protected double[]	attributes(Protein protein) Returns the attributes according to the actual attribute-assigner.
java.lang.String	getAttributeDefinition() Provides the attribute-definition in arff-format with an ending newline.

Methods inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractGroupAssigner

getGroupIndex

Methods inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractArffRealAttributeAssigner

getAttribute

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AbstractGroupTransitionAssigner

protected AbstractGroupTransitionAssigner()

Method Detail

getAttributeDefinition

public java.lang.String getAttributeDefinition()

Description copied from interface: ArffAttributeAssigner

Provides the attribute-definition in arff-format with an ending newline.

Specified by:

getAttributeDefinition in interface ArffAttributeAssigner

Overrides:

getAttributeDefinition in class AbstractGroupAssigner

See Also:

ArffAttributeAssigner.getAttributeDefinition()

attributes

protected double[] attributes(Protein protein)

Description copied from class: AbstractArffRealAttributeAssigner

Returns the attributes according to the actual attribute-assigner.

Specified by:

attributes in class AbstractArffRealAttributeAssigner

Parameters:

protein -

Returns:

double[]

See Also:

AbstractArffRealAttributeAssigner.attributes(Protein)