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java.lang.Object de.zimek.proteinfeatures.parser.AbstractParser de.zimek.proteinfeatures.parser.ManifoldParser
Field Summary | |
java.util.Properties |
DOMAIN2SCOP
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Constructor Summary | |
ManifoldParser()
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Method Summary | |
Protein[] |
parse(java.io.File in)
|
Protein |
parseSingleProtein(java.io.File in)
Parses the proteins as given in the MANIFOLD directory. |
Methods inherited from class de.zimek.proteinfeatures.parser.AbstractParser |
print, printForMotifScan |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
public final java.util.Properties DOMAIN2SCOP
Constructor Detail |
public ManifoldParser()
Method Detail |
public Protein[] parse(java.io.File in) throws java.text.ParseException, java.io.FileNotFoundException
java.text.ParseException
java.io.FileNotFoundException
Parser.parse(java.io.File)
public Protein parseSingleProtein(java.io.File in) throws java.text.ParseException, java.io.FileNotFoundException
in
-
java.text.ParseException
java.io.FileNotFoundException
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