de.zimek.proteinfeatures.aaindex
Class OobatakeOoi

java.lang.Object
  de.zimek.proteinfeatures.aaindex.OobatakeOoi

All Implemented Interfaces:

AAIndex

public class OobatakeOoi

extends java.lang.Object

implements AAIndex

H OOBM770104 D Average non-bonded energy per residue (Oobatake-Ooi, 1977) R LIT:2004111b PMID:904331 A Oobatake, M. and Ooi, T. T An analysis of non-bonded energy of proteins J J. Theor. Biol. 67, 567-584 (1977) Last two calculated by Kidera; multiplied by the number of heavy atoms C OOBM770105 0.980 I A/L R/K N/M D/F C/P Q/S E/T G/W H/Y I/V -9.475 -16.225 -12.480 -12.144 -12.210 -13.689 -13.815 -7.592 -17.550 -15.608 15.728 -12.366 -15.704 -20.504 -11.893 -10.518 -12.369 -26.166 -20.232 -13.867

Author:

Arthur Zimek

Constructor Summary

OobatakeOoi()

Method Summary

double	aaIndexFor(char aa) Returns the aaindex for the given amino acid according to Oobatake-Ooi.
java.lang.String	getAAIndexName() Returns the name of this AAIndex: OobatakeOoi.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OobatakeOoi

public OobatakeOoi()

Method Detail

aaIndexFor

public double aaIndexFor(char aa)

Returns the aaindex for the given amino acid according to Oobatake-Ooi.

Specified by:

aaIndexFor in interface AAIndex

Parameters:

aa -

Returns:

double

See Also:

AAIndex.aaIndexFor(char)

getAAIndexName

public java.lang.String getAAIndexName()

Returns the name of this AAIndex: OobatakeOoi.

Specified by:

getAAIndexName in interface AAIndex

Returns:

String

See Also:

AAIndex.getAAIndexName()