de.zimek.proteinfeatures.attributeAssigner.composition
Class AbstractGroupCompositionAssigner

java.lang.Object
  de.zimek.proteinfeatures.attributeAssigner.AbstractArffRealAttributeAssigner
      de.zimek.proteinfeatures.attributeAssigner.AbstractGroupAssigner
          de.zimek.proteinfeatures.attributeAssigner.composition.AbstractGroupCompositionAssigner

All Implemented Interfaces:

ArffAttributeAssigner

Direct Known Subclasses:

AAComposition, HydrophobicityComposition, NormalizedVanDerWaalsVolumeComposition, PolarityComposition, PolarizabilityComposition, SSComposition

public abstract class AbstractGroupCompositionAssigner

extends AbstractGroupAssigner

Author:

Arthur Zimek

Field Summary

Fields inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractGroupAssigner

group, type

Fields inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractArffRealAttributeAssigner

WHITESPACE

Fields inherited from interface de.zimek.proteinfeatures.attributeAssigner.ArffAttributeAssigner

ATTRIBUTE_MARK

Constructor Summary

protected

AbstractGroupCompositionAssigner()

Method Summary

protected double[]

attributes(Protein protein) Returns the attributes according to the actual attribute-assigner.

Methods inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractGroupAssigner

getAttributeDefinition, getGroupIndex

Methods inherited from class de.zimek.proteinfeatures.attributeAssigner.AbstractArffRealAttributeAssigner

getAttribute

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AbstractGroupCompositionAssigner

protected AbstractGroupCompositionAssigner()

Method Detail

attributes

protected double[] attributes(Protein protein)

Description copied from class: AbstractArffRealAttributeAssigner

Returns the attributes according to the actual attribute-assigner.

Specified by:

attributes in class AbstractArffRealAttributeAssigner

Parameters:

protein -

Returns:

double[]

See Also:

AbstractArffRealAttributeAssigner.attributes(Protein)