de.zimek.proteinfeatures.protein
Class CathID

java.lang.Object
  de.zimek.proteinfeatures.protein.ID
      de.zimek.proteinfeatures.protein.CathID

All Implemented Interfaces:

java.lang.Comparable

public class CathID

extends ID

Author:

Arthur Zimek

Field Summary

private int	architecture
static int	ARCHITECTURE
static java.util.regex.Pattern	CATH_HIERARCHY_SEPARATOR
static java.lang.String	CATH_ID_SEPARATOR
static int	CLASS
private int	classID
static int	HOMOLOGOUS_SUPERFAMILY
private int	homologousSuperfamily
private int	topology
static int	TOPOLOGY

Constructor Summary

CathID(java.lang.String cathID)

Method Summary

int	compareTo(java.lang.Object o)
ID	createID(java.lang.String id) Returns a new ID for the given id-String.
boolean	equals(java.lang.Object o) Returns true, if the ID equals another ID at all levels, false otherwise.
int	getArchitecture()
int	getClassID()
int	getHomologousSuperFamily()
java.lang.String	getID(int level) Returns the ID for the first level levels.
int	getLevel(int level) Returns the id-value in the specified level.
int	getTopology()
java.lang.String	toString() Provides a String-representation for the ID.
java.lang.String	type() Returns a String describing the type of the ID.

Methods inherited from class de.zimek.proteinfeatures.protein.ID

hashCode

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

CATH_ID_SEPARATOR

public static final java.lang.String CATH_ID_SEPARATOR

See Also:

Constant Field Values

CATH_HIERARCHY_SEPARATOR

public static final java.util.regex.Pattern CATH_HIERARCHY_SEPARATOR

CLASS

public static final int CLASS

See Also:

Constant Field Values

ARCHITECTURE

public static final int ARCHITECTURE

See Also:

Constant Field Values

TOPOLOGY

public static final int TOPOLOGY

See Also:

Constant Field Values

HOMOLOGOUS_SUPERFAMILY

public static final int HOMOLOGOUS_SUPERFAMILY

See Also:

Constant Field Values

classID

private int classID

architecture

private int architecture

topology

private int topology

homologousSuperfamily

private int homologousSuperfamily

Constructor Detail

CathID

public CathID(java.lang.String cathID)

Method Detail

toString

public java.lang.String toString()

Description copied from class: ID

Provides a String-representation for the ID.

Specified by:

toString in class ID

See Also:

Object.toString()

getID

public java.lang.String getID(int level)

Description copied from class: ID

Returns the ID for the first level levels.

Specified by:

getID in class ID

Parameters:

level -

Returns:

String

equals

public boolean equals(java.lang.Object o)

Description copied from class: ID

Returns true, if the ID equals another ID at all levels, false otherwise.

Specified by:

equals in class ID

See Also:

Object.equals(Object)

compareTo

public int compareTo(java.lang.Object o)

See Also:

Comparable.compareTo(java.lang.Object)

getClassID

public int getClassID()

Returns:

int

getHomologousSuperFamily

public int getHomologousSuperFamily()

Returns:

int

getArchitecture

public int getArchitecture()

Returns:

int

getTopology

public int getTopology()

Returns:

int

getLevel

public int getLevel(int level)

Description copied from class: ID

Returns the id-value in the specified level.

Specified by:

getLevel in class ID

Parameters:

level -

Returns:

int

createID

public ID createID(java.lang.String id)

Description copied from class: ID

Returns a new ID for the given id-String.

Specified by:

createID in class ID

Parameters:

id -

Returns:

ID

See Also:

ID.createID(String)

type

public java.lang.String type()

Description copied from class: ID

Returns a String describing the type of the ID.

Specified by:

type in class ID

Returns:

String

See Also:

ID.type()